| # Copyright 2016 The TensorFlow Authors. All Rights Reserved. |
| # |
| # Licensed under the Apache License, Version 2.0 (the "License"); |
| # you may not use this file except in compliance with the License. |
| # You may obtain a copy of the License at |
| # |
| # http://www.apache.org/licenses/LICENSE-2.0 |
| # |
| # Unless required by applicable law or agreed to in writing, software |
| # distributed under the License is distributed on an "AS IS" BASIS, |
| # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. |
| # See the License for the specific language governing permissions and |
| # limitations under the License. |
| # ============================================================================== |
| """Multivariate Normal distribution classes.""" |
| |
| from __future__ import absolute_import |
| from __future__ import division |
| from __future__ import print_function |
| |
| from tensorflow.contrib.distributions.python.ops import mvn_linear_operator as mvn_linop |
| from tensorflow.python.framework import ops |
| from tensorflow.python.ops.distributions import util as distribution_util |
| from tensorflow.python.ops.linalg import linalg |
| from tensorflow.python.util import deprecation |
| |
| |
| __all__ = [ |
| "MultivariateNormalTriL", |
| ] |
| |
| |
| class MultivariateNormalTriL( |
| mvn_linop.MultivariateNormalLinearOperator): |
| """The multivariate normal distribution on `R^k`. |
| |
| The Multivariate Normal distribution is defined over `R^k` and parameterized |
| by a (batch of) length-`k` `loc` vector (aka "mu") and a (batch of) `k x k` |
| `scale` matrix; `covariance = scale @ scale.T` where `@` denotes |
| matrix-multiplication. |
| |
| #### Mathematical Details |
| |
| The probability density function (pdf) is, |
| |
| ```none |
| pdf(x; loc, scale) = exp(-0.5 ||y||**2) / Z, |
| y = inv(scale) @ (x - loc), |
| Z = (2 pi)**(0.5 k) |det(scale)|, |
| ``` |
| |
| where: |
| |
| * `loc` is a vector in `R^k`, |
| * `scale` is a matrix in `R^{k x k}`, `covariance = scale @ scale.T`, |
| * `Z` denotes the normalization constant, and, |
| * `||y||**2` denotes the squared Euclidean norm of `y`. |
| |
| A (non-batch) `scale` matrix is: |
| |
| ```none |
| scale = scale_tril |
| ``` |
| |
| where `scale_tril` is lower-triangular `k x k` matrix with non-zero diagonal, |
| i.e., `tf.diag_part(scale_tril) != 0`. |
| |
| Additional leading dimensions (if any) will index batches. |
| |
| The MultivariateNormal distribution is a member of the [location-scale |
| family](https://en.wikipedia.org/wiki/Location-scale_family), i.e., it can be |
| constructed as, |
| |
| ```none |
| X ~ MultivariateNormal(loc=0, scale=1) # Identity scale, zero shift. |
| Y = scale @ X + loc |
| ``` |
| |
| Trainable (batch) lower-triangular matrices can be created with |
| `tfp.distributions.matrix_diag_transform()` and/or |
| `tfp.distributions.fill_triangular()` |
| |
| #### Examples |
| |
| ```python |
| import tensorflow_probability as tfp |
| tfd = tfp.distributions |
| |
| # Initialize a single 3-variate Gaussian. |
| mu = [1., 2, 3] |
| cov = [[ 0.36, 0.12, 0.06], |
| [ 0.12, 0.29, -0.13], |
| [ 0.06, -0.13, 0.26]] |
| scale = tf.cholesky(cov) |
| # ==> [[ 0.6, 0. , 0. ], |
| # [ 0.2, 0.5, 0. ], |
| # [ 0.1, -0.3, 0.4]]) |
| mvn = tfd.MultivariateNormalTriL( |
| loc=mu, |
| scale_tril=scale) |
| |
| mvn.mean().eval() |
| # ==> [1., 2, 3] |
| |
| # Covariance agrees with cholesky(cov) parameterization. |
| mvn.covariance().eval() |
| # ==> [[ 0.36, 0.12, 0.06], |
| # [ 0.12, 0.29, -0.13], |
| # [ 0.06, -0.13, 0.26]] |
| |
| # Compute the pdf of an observation in `R^3` ; return a scalar. |
| mvn.prob([-1., 0, 1]).eval() # shape: [] |
| |
| # Initialize a 2-batch of 3-variate Gaussians. |
| mu = [[1., 2, 3], |
| [11, 22, 33]] # shape: [2, 3] |
| tril = ... # shape: [2, 3, 3], lower triangular, non-zero diagonal. |
| mvn = tfd.MultivariateNormalTriL( |
| loc=mu, |
| scale_tril=tril) |
| |
| # Compute the pdf of two `R^3` observations; return a length-2 vector. |
| x = [[-0.9, 0, 0.1], |
| [-10, 0, 9]] # shape: [2, 3] |
| mvn.prob(x).eval() # shape: [2] |
| |
| # Instantiate a "learnable" MVN. |
| dims = 4 |
| with tf.variable_scope("model"): |
| mvn = tfd.MultivariateNormalTriL( |
| loc=tf.get_variable(shape=[dims], dtype=tf.float32, name="mu"), |
| scale_tril=tfd.fill_triangular( |
| tf.get_variable(shape=[dims * (dims + 1) / 2], |
| dtype=tf.float32, name="chol_Sigma"))) |
| ``` |
| |
| """ |
| |
| @deprecation.deprecated( |
| "2018-10-01", |
| "The TensorFlow Distributions library has moved to " |
| "TensorFlow Probability " |
| "(https://github.com/tensorflow/probability). You " |
| "should update all references to use `tfp.distributions` " |
| "instead of `tf.contrib.distributions`.", |
| warn_once=True) |
| def __init__(self, |
| loc=None, |
| scale_tril=None, |
| validate_args=False, |
| allow_nan_stats=True, |
| name="MultivariateNormalTriL"): |
| """Construct Multivariate Normal distribution on `R^k`. |
| |
| The `batch_shape` is the broadcast shape between `loc` and `scale` |
| arguments. |
| |
| The `event_shape` is given by last dimension of the matrix implied by |
| `scale`. The last dimension of `loc` (if provided) must broadcast with this. |
| |
| Recall that `covariance = scale @ scale.T`. A (non-batch) `scale` matrix is: |
| |
| ```none |
| scale = scale_tril |
| ``` |
| |
| where `scale_tril` is lower-triangular `k x k` matrix with non-zero |
| diagonal, i.e., `tf.diag_part(scale_tril) != 0`. |
| |
| Additional leading dimensions (if any) will index batches. |
| |
| Args: |
| loc: Floating-point `Tensor`. If this is set to `None`, `loc` is |
| implicitly `0`. When specified, may have shape `[B1, ..., Bb, k]` where |
| `b >= 0` and `k` is the event size. |
| scale_tril: Floating-point, lower-triangular `Tensor` with non-zero |
| diagonal elements. `scale_tril` has shape `[B1, ..., Bb, k, k]` where |
| `b >= 0` and `k` is the event size. |
| validate_args: Python `bool`, default `False`. When `True` distribution |
| parameters are checked for validity despite possibly degrading runtime |
| performance. When `False` invalid inputs may silently render incorrect |
| outputs. |
| allow_nan_stats: Python `bool`, default `True`. When `True`, |
| statistics (e.g., mean, mode, variance) use the value "`NaN`" to |
| indicate the result is undefined. When `False`, an exception is raised |
| if one or more of the statistic's batch members are undefined. |
| name: Python `str` name prefixed to Ops created by this class. |
| |
| Raises: |
| ValueError: if neither `loc` nor `scale_tril` are specified. |
| """ |
| parameters = dict(locals()) |
| def _convert_to_tensor(x, name): |
| return None if x is None else ops.convert_to_tensor(x, name=name) |
| if loc is None and scale_tril is None: |
| raise ValueError("Must specify one or both of `loc`, `scale_tril`.") |
| with ops.name_scope(name) as name: |
| with ops.name_scope("init", values=[loc, scale_tril]): |
| loc = _convert_to_tensor(loc, name="loc") |
| scale_tril = _convert_to_tensor(scale_tril, name="scale_tril") |
| if scale_tril is None: |
| scale = linalg.LinearOperatorIdentity( |
| num_rows=distribution_util.dimension_size(loc, -1), |
| dtype=loc.dtype, |
| is_self_adjoint=True, |
| is_positive_definite=True, |
| assert_proper_shapes=validate_args) |
| else: |
| # No need to validate that scale_tril is non-singular. |
| # LinearOperatorLowerTriangular has an assert_non_singular |
| # method that is called by the Bijector. |
| scale = linalg.LinearOperatorLowerTriangular( |
| scale_tril, |
| is_non_singular=True, |
| is_self_adjoint=False, |
| is_positive_definite=False) |
| super(MultivariateNormalTriL, self).__init__( |
| loc=loc, |
| scale=scale, |
| validate_args=validate_args, |
| allow_nan_stats=allow_nan_stats, |
| name=name) |
| self._parameters = parameters |