| [/============================================================================ |
| Boost.odeint |
| |
| Copyright 2011 Mario Mulansky |
| Copyright 2012 Karsten Ahnert |
| Copyright 2013 Pascal Germroth |
| |
| Use, modification and distribution is subject to the Boost Software License, |
| Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at |
| http://www.boost.org/LICENSE_1_0.txt) |
| =============================================================================/] |
| |
| |
| |
| [section State Algebra Operations] |
| |
| [note The following does not apply to implicit steppers like implicit_euler or Rosenbrock 4 as there the `state_type` can not be changed from `ublas::vector` and no algebra/operations are used.] |
| |
| [heading Description] |
| |
| The `State`, `Algebra` and `Operations` together define a concept describing how the mathematical vector operations required for the stepper algorithms are performed. |
| The typical vector operation done within steppers is |
| |
| ['*y* = __Sigma __alpha[sub i] [*x[sub i]]]. |
| |
| The `State` represents the state variable of an ODE, usually denoted with /x/. |
| Algorithmically, the state is often realized as a `vector< double >` or `array< double , N >`, however, the genericity of odeint enables you to basically use anything as a state type. |
| The algorithmic counterpart of such mathematical expressions is divided into two parts. |
| First, the `Algebra` is used to account for the vector character of the equation. |
| In the case of a `vector` as state type this means the `Algebra` is responsible for iteration over all vector elements. |
| Second, the `Operations` are used to represent the actual operation applied to each of the vector elements. |
| So the `Algebra` iterates over all elements of the `State`s and calls an operation taken from the `Operations` for each element. |
| This is where `State`, `Algebra` and `Operations` have to work together to make odeint running. |
| Please have a look at the `range_algebra` and `default_operations` to see an example how this is implemented. |
| |
| In the following we describe how `State`, `Algebra` and `Operations` are used together within the stepper implementations. |
| |
| [section Operations] |
| |
| [heading Notation] |
| |
| [variablelist |
| [[`Operations`] [The operations type]] |
| [/[`Time`] [A type representing the time type of steppers]] |
| [[`Value1`, ... , `ValueN`] [Types representing the value or time type of stepper]] |
| [[`Scale`] [Type of the scale operation]] |
| [[`scale`] [Object of type `Scale`]] |
| [[[^ScaleSum['N]]] [Type that represents a general scale_sum operation, [^/N/] should be replaced by a number from 1 to 14.]] |
| [[[^scale_sum['N]]] [Object of type [^ScaleSum['N]], [^/N/] should be replaced by a number from 1 to 14.]] |
| [[`ScaleSumSwap2`] [Type of the scale sum swap operation]] |
| [[`scale_sum_swap2`] [Object of type `ScaleSumSwap2`]] |
| [[`a1, a2, ...`] [Objects of type `Value1`, `Value2`, ...]] |
| [[`y, x1, x2, ...`] [Objects of `State`'s value type]] |
| ] |
| |
| [heading Valid Expressions] |
| |
| [table |
| [[Name] [Expression] [Type] [Semantics]] |
| [[Get scale operation] [`Operations::scale< Value >`] [`Scale`] [Get `Scale` from `Operations`]] |
| [[`Scale` constructor] [`Scale< Value >( a )`] [`Scale`] [Constructs a `Scale` object]] |
| [[`Scale` operation] [`scale( x )`] [`void`] [Calculates `x *= a`]] |
| [[Get general `scale_sum` operation] [[^Operations::scale_sum['N]< Value1 , ... , ValueN >]] [[^ScaleSum['N]]] [Get the [^ScaleSum['N]] type from `Operations`, [^/N/] should be replaced by a number from 1 to 14.]] |
| [[`scale_sum` constructor] [[^ScaleSum['N]< Value1 , ... , ValueN >( a1 , ... , aN )]] [[^ScaleSum['N]]] [Constructs a `scale_sum` object given [^/N/] parameter values with [^/N/] between 1 and 14.]] |
| [[`scale_sum` operation] [[^scale_sum['N]( y , x1 , ... , xN )]] [`void`] [Calculates `y = a1*x1 + a2*x2 + ... + aN*xN`. Note that this is an [^/N/+1]-ary function call.]] |
| [[Get scale sum swap operation] [`Operations::scale_sum_swap2< Value1 , Value2 >`] [`ScaleSumSwap2`] [Get scale sum swap from operations]] |
| [[`ScaleSumSwap2` constructor] [`ScaleSumSwap2< Value1 , Value2 >( a1 , a2 )`] [`ScaleSumSwap2`] [Constructor]] |
| [[`ScaleSumSwap2` operation] [`scale_sum_swap2( x1 , x2 , x3 )`] [`void`] [Calculates `tmp = x1`, `x1 = a1*x2 + a2*x3` and `x2 = tmp`.]] |
| ] |
| |
| [endsect] |
| |
| [section Algebra] |
| |
| [heading Notation] |
| |
| [variablelist |
| [[`State`] [The state type]] |
| [[`Algebra`] [The algebra type]] |
| [[[^Operation['N]]] [An [^/N/]-ary operation type, [^/N/] should be a number from 1 to 14.]] |
| [[`algebra`] [Object of type `Algebra`]] |
| [[[^operation['N]]] [Object of type [^Operation['N]]]] |
| [[`y, x1, x2, ...`] [Objects of type `State`]] |
| ] |
| |
| |
| [heading Valid Expressions] |
| |
| [table |
| [[Name] [Expression] [Type] [Semantics]] |
| [[Vector Operation with arity 2] [`algebra.for_each2( y , x , operation2 )`] [void] [Calls `operation2( y_i , x_i )` for each element `y_i` of `y` and `x_i` of `x`.]] |
| [[Vector Operation with arity 3] [`algebra.for_each3( y , x1 , x2 , operation3 )`] [void] [Calls `operation3( y_i , x1_i , x2_i )` for each element `y_i` of `y` and `x1_i` of `x1` and `x2_i` of `x2`.]] |
| [[Vector Operation with arity [^/N/]] [[^algebra.for_each['N]( y , x1 , ... , xN , operation['N] )]] [void] [Calls [^operation['N]( y_i , x1_i , ... , xN_i )] for each element `y_i` of `y` and `x1_i` of `x1` and so on. [^/N/] should be replaced by a number between 1 and 14.]] |
| ] |
| |
| [endsect] |
| |
| [section Pre-Defined implementations] |
| |
| As standard configuration odeint uses the `range_algebra` and `default_operations` which suffices most situations. |
| However, a few more possibilities exist either to gain better performance or to ensure interoperability with other libraries. |
| In the following we list the existing `Algebra`/`Operations` configurations that can be used in the steppers. |
| |
| [table |
| [[`State`] [`Algebra`] [`Operations`] [Remarks]] |
| [[Anything supporting __boost_range, like `std::vector`, `std::list`, `boost::array`,... based on a `value_type` that supports operators +,* (typically `double`)] [`range_algebra`] [`default_operations`] [Standard implementation, applicable for most typical situations.]] |
| [[`boost::array` based on a `value_type` that supports operators +,*] [`array_algebra`] [`default_operations`] [Special implementation for boost::array with better performance than `range_algebra`]] |
| [[Anything that defines operators + within itself and * with scalar (Mathematically spoken, anything that is a vector space).] [`vector_space_algebra`] [`default_operations`] [For the use of __controlled_stepper, the template `vector_space_reduce` has to be instantiated.]] |
| [[`thrust::device_vector`, `thrust::host_vector`] [`thrust_algebra`] [`thrust_operations`] [For running odeint on CUDA devices by using __thrust]] |
| [[Any RandomAccessRange] [`openmp_range_algebra`] [`default_operations`] [OpenMP-parallelised range algebra]] |
| [[`openmp_state`] [`openmp_algebra`] [`default_operations`] [OpenMP-parallelised algebra for split data]] |
| [[`boost::array` or anything which allocates the elements in a C-like manner] [`vector_space_algebra`] [`mkl_operations`] [Using the __intel_mkl in odeint for maximum performance. Currently, only the RK4 stepper is supported.]] |
| ] |
| |
| [endsect] |
| |
| [section Example expressions] |
| |
| [table |
| [[Name] [Expression] [Type] [Semantics]] |
| [[Vector operation] [`algebra.for_each3( y , x1 , x2 , Operations::scale_sum2< Value1 , Value2 >( a1 , a2 ) )`] [void] [Calculates ['*y* = a1 *x1* + a2 *x2*]]] |
| ] |
| |
| [endsect] |
| |
| [endsect] |
