| # Copyright 1999-2011 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Id$ |
| |
| EAPI=3 |
| |
| inherit eutils toolchain-funcs |
| |
| MY_P="${PN}.${PV}.src" |
| |
| DESCRIPTION="Adds hydrogens to a Protein Data Bank (PDB) molecule structure file" |
| HOMEPAGE="http://kinemage.biochem.duke.edu/software/reduce.php" |
| SRC_URI="http://kinemage.biochem.duke.edu/downloads/software/reduce31/${MY_P}.tgz" |
| |
| LICENSE="richardson" |
| SLOT="0" |
| KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux" |
| IUSE="" |
| |
| RDEPEND="" |
| DEPEND="${RDEPEND} |
| app-arch/unzip" |
| |
| S="${WORKDIR}/${MY_P}" |
| |
| src_prepare() { |
| epatch \ |
| "${FILESDIR}"/${PV}-LDFLAGS.patch \ |
| "${FILESDIR}"/${PV}-CFLAGS.patch |
| } |
| |
| src_compile() { |
| DICT_DIR="/usr/share/reduce" |
| DICT_FILE="reduce_het_dict.txt" |
| |
| emake \ |
| CC="$(tc-getCC)" \ |
| CXX="$(tc-getCXX)" \ |
| OPT="${CXXFLAGS}" \ |
| DICT_HOME="${EPREFIX}/${DICT_DIR}/${DICT_FILE}" \ |
| || die "make failed" |
| } |
| |
| src_install() { |
| dobin "${S}"/reduce_src/reduce || die |
| insinto ${DICT_DIR} |
| doins "${S}"/${DICT_FILE} "${S}"/reduce_wwPDB_het_dict.txt || die |
| dodoc README.usingReduce.txt || die |
| } |
| |
| pkg_postinst() { |
| elog "To use the PDBv3 dictionary instead of PDBv2, set the environment" |
| elog "variable REDUCE_HET_DICT to ${EPREFIX}/usr/share/reduce/reduce_wwPDB_het_dict.txt" |
| } |
