| # Copyright 1999-2015 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Id$ |
| |
| EAPI=5 |
| |
| inherit cmake-utils |
| |
| DESCRIPTION="A programmer's API and an end-user's toolkit for handling BAM files" |
| HOMEPAGE="https://github.com/pezmaster31/bamtools" |
| SRC_URI="mirror://github/pezmaster31/bamtools/"${P}".tar.gz" |
| |
| LICENSE="MIT" |
| SLOT="0" |
| KEYWORDS="~amd64 ~x86" |
| IUSE="" |
| |
| RDEPEND=" |
| dev-libs/jsoncpp |
| sys-libs/zlib" |
| DEPEND="${RDEPEND}" |
| |
| src_prepare() { |
| sed \ |
| -e '/third_party/d' \ |
| -i src/CMakeLists.txt || die |
| rm -r src/third_party || die |
| |
| sed \ |
| -e 's:json.h:json/json.h:g' \ |
| -i src/toolkit/bamtools_filter.cpp || die |
| |
| cmake-utils_src_prepare |
| } |
| |
| src_install() { |
| local i |
| for i in bin/bamtools-${PV} lib/libbamtools.so.${PV} lib/libbamtools-utils.so.${PV}; do |
| TMPDIR="$(pwd)" scanelf -Xr $i || die |
| done |
| |
| dobin bin/bamtools |
| dolib.so lib/*so* |
| use static-libs && dolib.a lib/*a |
| insinto /usr/include/bamtools |
| doins include/api include/shared |
| dodoc README |
| } |
