| # Copyright 1999-2014 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Id$ |
| |
| EAPI=5 |
| |
| inherit cmake-utils |
| |
| DESCRIPTION="Streaming RNA-Seq Analysis" |
| HOMEPAGE="http://bio.math.berkeley.edu/eXpress/" |
| SRC_URI="http://bio.math.berkeley.edu/eXpress/downloads/${P}/${P}-src.tgz" |
| |
| LICENSE="Artistic" |
| SLOT="0" |
| KEYWORDS="~amd64 ~x86" |
| IUSE="" |
| |
| DEPEND=" |
| >=dev-libs/boost-1.52.0:= |
| dev-libs/protobuf |
| dev-util/google-perftools |
| sys-libs/zlib |
| sci-biology/bamtools" |
| RDEPEND="${DEPEND}" |
| |
| S="${WORKDIR}/${P}-src" |
| |
| PATCHES=( |
| "${FILESDIR}"/${P}-buildsystem.patch |
| ) |
| |
| src_configure() { |
| local mycmakeargs=( |
| -DBAMTOOLS_INCLUDE="${EPREFIX}/usr/include/bamtools" |
| ) |
| cmake-utils_src_configure |
| } |
