| # Copyright 1999-2015 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Id$ |
| |
| EAPI="2" |
| |
| ESVN_REPO_URI="https://mauve.svn.sourceforge.net/svnroot/mauve/mauve/trunk" |
| |
| WANT_ANT_TASKS="ant-nodeps" |
| EANT_GENTOO_CLASSPATH="biojava,zeus-jscl,dbus-java" |
| JAVA_ANT_REWRITE_CLASSPATH="true" |
| JAVA_PKG_BSFIX_NAME="build.xml" |
| |
| inherit subversion java-pkg-2 java-ant-2 eutils |
| |
| DESCRIPTION="Multiple genome alignment with large-scale evolutionary events (GUI component)" |
| HOMEPAGE="http://gel.ahabs.wisc.edu/mauve/" |
| SRC_URI="" |
| |
| LICENSE="GPL-2" |
| SLOT="0" |
| IUSE="doc" |
| KEYWORDS="" |
| |
| CDEPEND="~sci-biology/biojava-1.6 |
| >=dev-java/dbus-java-2.5.1 |
| ~dev-java/zeus-jscl-1.08 |
| dev-java/ant-nodeps" |
| RDEPEND=">=virtual/jre-1.5 |
| sci-biology/mauvealigner |
| ${CDEPEND}" |
| DEPEND=">=virtual/jdk-1.5 |
| media-gfx/icoutils |
| ${CDEPEND}" |
| |
| S="${WORKDIR}" |
| |
| java_prepare() { |
| find -name '*.jar' -not -name 'jarbundler*' -print -delete |
| perl -i -ne 'print unless /<dmg/ or /<taskdef.+name="dmg"/../<\/taskdef>/' build.xml |
| perl -i -ne 'print unless /<ssh/../<\/ssh/ or /<taskdef.+name="ssh"/../<\/taskdef>/' build.xml |
| perl -i -ne 'print unless /<retroweaver/ or /<taskdef.+name="retroweaver"/../<\/taskdef>/' build.xml |
| } |
| |
| src_install() { |
| java-pkg_dojar Mauve.jar |
| |
| java-pkg_dolauncher Mauve --main org.gel.mauve.gui.Mauve |
| |
| icotool -x win32/mauve.ico |
| insinto /usr/share/pixmaps |
| newins mauve_4_48x48x32.png Mauve.png |
| make_desktop_entry Mauve Mauve Mauve |
| } |
