| # Copyright 1999-2015 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Id$ |
| |
| EAPI=5 |
| |
| PERL_EXPORT_PHASE_FUNCTIONS=no |
| inherit perl-module eutils toolchain-funcs |
| |
| MY_P="${PN}_${PV}" |
| |
| DESCRIPTION="Tools for working with VCF (Variant Call Format) files" |
| HOMEPAGE="http://vcftools.sourceforge.net/" |
| SRC_URI="mirror://sourceforge/${PN}/${MY_P}.tar.gz" |
| |
| LICENSE="LGPL-3" |
| SLOT="0" |
| KEYWORDS="~x86 ~amd64" |
| IUSE="lapack" |
| |
| RDEPEND="lapack? ( virtual/lapack )" |
| DEPEND="${RDEPEND} |
| virtual/pkgconfig" |
| |
| S="${WORKDIR}/${MY_P}" |
| |
| src_prepare() { |
| epatch "${FILESDIR}"/${P}-buildsystem.patch |
| tc-export CXX PKG_CONFIG |
| } |
| |
| src_compile() { |
| local myconf |
| use lapack && myconf="VCFTOOLS_PCA=1" |
| emake -C cpp ${myconf} |
| } |
| |
| src_install(){ |
| perl_set_version |
| dobin cpp/${PN} |
| insinto ${VENDOR_LIB} |
| doins perl/*.pm |
| dobin perl/{fill,vcf}-* |
| dodoc README.txt |
| } |
