| # Copyright 1999-2015 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Id$ |
| |
| EAPI=5 |
| |
| inherit toolchain-funcs versionator |
| |
| MY_P=$(version_format_string '${PN}$1$2') |
| |
| DESCRIPTION="Phylogenetic Analysis by Maximum Likelihood" |
| HOMEPAGE="http://abacus.gene.ucl.ac.uk/software/paml.html" |
| SRC_URI="http://abacus.gene.ucl.ac.uk/software/${PN}${PV}.tar.gz" |
| |
| LICENSE="free-noncomm" |
| SLOT="0" |
| KEYWORDS="amd64 x86" |
| IUSE="" |
| |
| S=${WORKDIR}/${MY_P} |
| |
| src_prepare() { |
| # Notice send by mail to prof. Ziheng Yang |
| sed -i "s/\$(CC)/& \$(LDFLAGS)/" src/Makefile || die #335608 |
| } |
| |
| src_compile() { |
| emake -C src \ |
| CC="$(tc-getCC)" \ |
| CFLAGS="${CFLAGS} -Wno-unused-result" \ |
| LDFLAGS="${LDFLAGS}" |
| } |
| |
| src_install() { |
| dodoc README.txt doc/* |
| |
| insinto /usr/share/${PN}/control |
| doins *.ctl |
| |
| insinto /usr/share/${PN}/dat |
| doins stewart* *.dat dat/* |
| |
| insinto /usr/share/${PN} |
| doins -r examples/ |
| |
| cd src || die |
| dobin baseml codeml basemlg mcmctree pamp evolver yn00 chi2 |
| } |