| # Copyright 1999-2010 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Id$ |
| |
| EAPI="2" |
| |
| DESCRIPTION="A reference-guided aligner for next-generation sequencing technologies" |
| HOMEPAGE="https://code.google.com/p/mosaik-aligner/" |
| SRC_URI="https://mosaik-aligner.googlecode.com/files/Mosaik-${PV}-source.tar.bz2" |
| |
| LICENSE="GPL-2" |
| SLOT="0" |
| IUSE="" |
| KEYWORDS="~amd64 ~x86" |
| |
| DEPEND="" |
| RDEPEND="" |
| |
| S="${WORKDIR}/mosaik-aligner" |
| |
| src_prepare() { |
| sed -i 's/-static//' src/includes/linux.inc || die |
| } |
| |
| src_compile() { |
| emake -C src || die |
| # emake -C MosaikTools/c++ || die |
| # emake -C MosaikTools/perl || die |
| } |
| |
| src_install() { |
| dobin bin/* || die |
| |
| insinto /usr/share/${PN} |
| doins -r MosaikTools || die |
| |
| dodoc README Mosaik-1.0-Documentation.pdf |
| } |
