| # Copyright 1999-2015 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Id$ |
| |
| EAPI="5" |
| |
| inherit perl-module git-2 |
| |
| DESCRIPTION="Perl tools for bioinformatics - Wrapper modules around key bioinformatics applications" |
| HOMEPAGE="http://www.bioperl.org/" |
| SRC_URI="" |
| EGIT_REPO_URI="git://github.com/bioperl/${PN}.git |
| https://github.com/bioperl/${PN}.git" |
| |
| LICENSE="Artistic GPL-2" |
| SLOT="0" |
| KEYWORDS="" |
| IUSE="-minimal test" |
| #SRC_TEST="do" |
| |
| RESTRICT="test" |
| |
| CDEPEND=">=sci-biology/bioperl-${PV} |
| !minimal? ( |
| dev-perl/Algorithm-Diff |
| dev-perl/XML-Twig |
| dev-perl/IO-String |
| dev-perl/IPC-Run |
| )" |
| DEPEND="dev-perl/Module-Build |
| ${CDEPEND}" |
| RDEPEND="${CDEPEND}" |
| |
| S="${WORKDIR}/BioPerl-run-${PV}" |
| |
| src_install() { |
| mydoc="AUTHORS BUGS FAQ" |
| perl-module_src_install |
| # TODO: File collision in Bio/ConfigData.pm (a Module::Build internal file) |
| # with sci-biology/bioperl. Workaround: the "nuke it from orbit" solution :D |
| find "${D}" -name '*ConfigData*' -print -delete |
| } |
