| # Copyright 1999-2015 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Id$ |
| |
| # @ECLASS: emboss-r1.eclass |
| # @MAINTAINER: |
| # sci-biology@gentoo.org |
| # jlec@gentoo.org |
| # ted.tanberry@gmail.com |
| # @AUTHOR: |
| # Original author: Author Olivier Fisette <ofisette@gmail.com> |
| # Next gen author: Justin Lecher <jlec@gentoo.org> |
| # Next gen author: Ted Tanberry <ted.tanberry@gmail.com> |
| # @BLURB: Use this to easy install EMBOSS and EMBASSY programs (EMBOSS add-ons). |
| # @DESCRIPTION: |
| # The inheriting ebuild must set at least EAPI=5 and provide EBO_DESCRIPTION before the inherit line. |
| # KEYWORDS should be set. Additionally "(R|P)DEPEND"encies and other standard |
| # ebuild variables can be extended (FOO+=" bar"). |
| # |
| # Example: |
| # |
| # EAPI="5" |
| # |
| # EBO_DESCRIPTION="applications from the CBS group" |
| # |
| # inherit emboss-r1 |
| |
| # @ECLASS-VARIABLE: EBO_DESCRIPTION |
| # @DEFAULT_UNSET |
| # @DESCRIPTION: |
| # Should be set. Completes the generic description of the embassy module as follows: |
| # |
| # EMBOSS integrated version of ${EBO_DESCRIPTION}, e.g. |
| # |
| # "EMBOSS integrated version of applications from the CBS group" |
| # |
| # Defaults to the upstream name of the module. |
| |
| # @ECLASS-VARIABLE: EBO_EXTRA_ECONF |
| # @DEFAULT_UNSET |
| # @DESCRIPTION: |
| # Extra config options passed to econf. |
| |
| case ${EAPI:-0} in |
| 5) ;; |
| *) die "this eclass doesn't support < EAPI 5" ;; |
| esac |
| |
| inherit autotools-utils eutils flag-o-matic |
| |
| HOMEPAGE="http://emboss.sourceforge.net/" |
| LICENSE="LGPL-2 GPL-2" |
| |
| SLOT="0" |
| IUSE="mysql pdf png postgres static-libs X" |
| |
| DEPEND=" |
| dev-libs/expat |
| dev-libs/libpcre:3 |
| sci-libs/plplot |
| sys-libs/zlib |
| mysql? ( virtual/mysql ) |
| pdf? ( media-libs/libharu ) |
| png? ( media-libs/gd[png] ) |
| postgres? ( dev-db/postgresql:= ) |
| X? ( x11-libs/libXt )" |
| RDEPEND="${DEPEND}" |
| |
| if [[ ${PN} == embassy-* ]]; then |
| EMBASSY_PACKAGE=yes |
| # The EMBASSY package name, retrieved from the inheriting ebuild's name |
| EN=${PN:8} |
| # The full name and version of the EMBASSY package (excluding the Gentoo |
| # revision number) |
| EF=$(echo ${EN} | tr "[:lower:]" "[:upper:]")-${PV} |
| : ${EBO_DESCRIPTION:=${EN}} |
| DESCRIPTION="EMBOSS integrated version of ${EBO_DESCRIPTION}" |
| SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/${EF}.tar.gz -> embassy-${EN}-${PVR}.tar.gz" |
| DEPEND+=" >=sci-biology/emboss-6.6.0[mysql=,pdf=,png=,postgres=,static-libs=,X=]" |
| |
| S="${WORKDIR}"/${EF} |
| fi |
| |
| # @FUNCTION: emboss-r1_src_prepare |
| # @DESCRIPTION: |
| # Does the following things |
| # |
| # 1. Renames configure.in to configure.ac, if possible |
| # 2. Applies ${PATCHES[@]} and runs autotools via autotools-utils.eclass |
| # |
| |
| emboss-r1_src_prepare() { |
| if [[ -e configure.in ]]; then |
| mv configure.{in,ac} || die |
| fi |
| |
| autotools-utils_src_prepare |
| } |
| |
| # @FUNCTION: emboss-r1_src_configure |
| # @DESCRIPTION: |
| # runs econf with following options. |
| # |
| # $(use_with X x) |
| # $(use_with png pngdriver) |
| # $(use_with pdf hpdf) |
| # $(use_with mysql mysql) |
| # $(use_with postgres postgresql) |
| # $(use_enable static-libs static) |
| # --enable-large |
| # --without-java |
| # --enable-systemlibs |
| # ${EBO_EXTRA_ECONF} |
| |
| emboss-r1_src_configure() { |
| local myeconfargs=( |
| $(use_with X x) |
| $(use_with png pngdriver "${EPREFIX}/usr") |
| $(use_with pdf hpdf "${EPREFIX}/usr") |
| $(use_with mysql mysql "${EPREFIX}/usr/bin/mysql_config") |
| $(use_with postgres postgresql "${EPREFIX}/usr/bin/pg_config") |
| --enable-large |
| --without-java |
| --enable-systemlibs |
| ${EBO_EXTRA_ECONF} |
| ) |
| |
| [[ ${EMBASSY_PACKAGE} == yes ]] && \ |
| append-cppflags "-I${EPREFIX}/usr/include/emboss" |
| |
| autotools-utils_src_configure |
| } |
| |
| EXPORT_FUNCTIONS src_prepare src_configure |