| # Copyright 1999-2012 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Id$ |
| |
| EAPI=3 |
| |
| inherit eutils flag-o-matic toolchain-funcs |
| |
| RELDATE="2011-01-31" |
| RELEASE="${PN}-v${PV}-${RELDATE}" |
| |
| DESCRIPTION="Clustering Database at High Identity with Tolerance" |
| HOMEPAGE="http://weizhong-lab.ucsd.edu/cd-hit/" |
| SRC_URI="https://cdhit.googlecode.com/files/${RELEASE}.tgz" |
| |
| SLOT="0" |
| KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" |
| LICENSE="GPL-2" |
| IUSE="openmp" |
| |
| S="${WORKDIR}"/${RELEASE} |
| |
| pkg_setup() { |
| use openmp && ! tc-has-openmp && die "Please switch to an openmp compatible compiler" |
| } |
| |
| src_prepare() { |
| tc-export CXX |
| use openmp || append-flags -DNO_OPENMP |
| epatch "${FILESDIR}"/${PV}-gentoo.patch |
| } |
| |
| src_compile() { |
| local myconf= |
| use openmp && myconf="openmp=yes" |
| emake ${myconf} || die |
| } |
| |
| src_install() { |
| dobin cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div *.pl || die |
| dodoc ChangeLog cdhit-user-guide.pdf || die |
| } |
