| # Copyright 1999-2013 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Id$ |
| |
| EAPI=4 |
| |
| inherit eutils toolchain-funcs |
| |
| DESCRIPTION="Protein sequences and profiles comparison" |
| HOMEPAGE="http://www.well.ox.ac.uk/ariadne/" |
| SRC_URI="http://www.well.ox.ac.uk/${PN}/${P}.tar.Z" |
| |
| LICENSE="ARIADNE" |
| SLOT="0" |
| KEYWORDS="~amd64 ~x86" |
| IUSE="static-libs" |
| |
| DEPEND=">=sci-biology/ncbi-tools-0.20041020-r1" |
| RDEPEND="${DEPEND}" |
| |
| S=${WORKDIR}/SRC-${PV} |
| |
| src_prepare() { |
| epatch "${FILESDIR}"/${P}-gcc4.patch \ |
| "${FILESDIR}"/${P}-implicits.patch |
| sed -i -e "s/\$(CFLAGS)/\$(LDFLAGS) &/" Makefile || die #359045 |
| sed -e "s/blosum62/BLOSUM62/" -i prospero.c || die |
| } |
| |
| src_compile() { |
| emake CC="$(tc-getCC)" OPTIMISE="${CFLAGS}" |
| } |
| |
| src_install() { |
| dobin Linux/{ariadne,prospero} |
| use static-libs && dolib.a Linux/libseq.a |
| insinto /usr/include/${PN} |
| doins Include/*.h || die |
| dodoc README || die |
| } |
