commit | f05d5bec48d16754913947fa64c31b6fa2684e33 | [log] [tgz] |
---|---|---|
author | Edward Yang <ezyang@fb.com> | Thu Jun 03 10:47:19 2021 -0700 |
committer | Facebook GitHub Bot <facebook-github-bot@users.noreply.github.com> | Thu Jun 03 10:50:36 2021 -0700 |
tree | 11155e9fc3d409cd9a3e60391d03d0a752592074 | |
parent | fa72d9a37922b12433870f7608f3aab5a04ff9e3 [diff] |
Preserve PyObject even when it goes dead (#56017) Summary: Pull Request resolved: https://github.com/pytorch/pytorch/pull/56017 Fixes #55686 This patch is seemingly straightforward but some of the changes are very subtle. For the general algorithmic approach, please first read the quoted issue. Based on the algorithm, there are some fairly straightforward changes: - New boolean on TensorImpl tracking if we own the pyobj or not - PythonHooks virtual interface for requesting deallocation of pyobj when TensorImpl is being released and we own its pyobj, and implementation of the hooks in python_tensor.cpp - Modification of THPVariable to MaybeOwned its C++ tensor, directly using swolchok's nice new class And then, there is python_variable.cpp. Some of the changes follow the general algorithmic approach: - THPVariable_NewWithVar is simply adjusted to handle MaybeOwned and initializes as owend (like before) - THPVariable_Wrap adds the logic for reverting ownership back to PyObject when we take out an owning reference to the Python object - THPVariable_dealloc attempts to resurrect the Python object if the C++ tensor is live, and otherwise does the same old implementation as before - THPVariable_tryResurrect implements the resurrection logic. It is modeled after CPython code so read the cited logic and see if it is faithfully replicated - THPVariable_clear is slightly updated for MaybeOwned and also to preserve the invariant that if owns_pyobj, then pyobj_ is not null. This change is slightly dodgy: the previous implementation has a comment mentioning that the pyobj nulling is required to ensure we don't try to reuse the dead pyobj. I don't think, in this new world, this is possible, because the invariant says that the pyobj only dies if the C++ object is dead too. But I still unset the field for safety. And then... there is THPVariableMetaType. colesbury explained in the issue why this is necessary: when destructing an object in Python, you start off by running the tp_dealloc of the subclass before moving up to the parent class (much in the same way C++ destructors work). The deallocation process for a vanilla Python-defined class does irreparable harm to the PyObject instance (e.g., the finalizers get run) making it no longer valid attempt to resurrect later in the tp_dealloc chain. (BTW, the fact that objects can resurrect but in an invalid state is one of the reasons why it's so frickin' hard to write correct __del__ implementations). So we need to make sure that we actually override the tp_dealloc of the bottom most *subclass* of Tensor to make sure we attempt a resurrection before we start finalizing. To do this, we need to define a metaclass for Tensor that can override tp_dealloc whenever we create a new subclass of Tensor. By the way, it was totally not documented how to create metaclasses in the C++ API, and it took a good bit of trial error to figure it out (and the answer is now immortalized in https://stackoverflow.com/q/67077317/23845 -- the things that I got wrong in earlier versions of the PR included setting tp_basicsize incorrectly, incorrectly setting Py_TPFLAGS_HAVE_GC on the metaclass--you want to leave it unset so that it inherits, and determining that tp_init is what actually gets called when you construct a class, not tp_call as another not-to-be-named StackOverflow question suggests). Aside: Ordinarily, adding a metaclass to a class is a user visible change, as it means that it is no longer valid to mixin another class with a different metaclass. However, because _C._TensorBase is a C extension object, it will typically conflict with most other metaclasses, so this is not BC breaking. The desired new behavior of a subclass tp_dealloc is to first test if we should resurrect, and otherwise do the same old behavior. In an initial implementation of this patch, I implemented this by saving the original tp_dealloc (which references subtype_dealloc, the "standard" dealloc for all Python defined classes) and invoking it. However, this results in an infinite loop, as it attempts to call the dealloc function of the base type, but incorrectly chooses subclass type (because it is not a subtype_dealloc, as we have overridden it; see https://github.com/python/cpython/blob/b38601d49675d90e1ee6faa47f7adaeca992d02d/Objects/typeobject.c#L1261 ) So, with great reluctance, I must duplicate the behavior of subtype_dealloc in our implementation. Note that this is not entirely unheard of in Python binding code; for example, Cython https://github.com/cython/cython/blob/c25c3ccc4b862592b06e66fd0fc508e4d388437b/Cython/Compiler/ModuleNode.py#L1560 also does similar things. This logic makes up the bulk of THPVariable_subclass_dealloc To review this, you should pull up the CPython copy of subtype_dealloc https://github.com/python/cpython/blob/b38601d49675d90e1ee6faa47f7adaeca992d02d/Objects/typeobject.c#L1230 and verify that I have specialized the implementation for our case appropriately. Among the simplifications I made: - I assume PyType_IS_GC, because I assume that Tensor subclasses are only ever done in Python and those classes are always subject to GC. (BTW, yes! This means I have broken anyone who has extend PyTorch tensor from C API directly. I'm going to guess no one has actually done this.) - I don't bother walking up the type bases to find the parent dealloc; I know it is always THPVariable_dealloc. Similarly, I can get rid of some parent type tests based on knowledge of how THPVariable_dealloc is defined - The CPython version calls some private APIs which I can't call, so I use the public PyObject_GC_UnTrack APIs. - I don't allow the finalizer of a Tensor to change its type (but more on this shortly) One alternative I discussed with colesbury was instead of copy pasting the subtype_dealloc, we could transmute the type of the object that was dying to turn it into a different object whose tp_dealloc is subtype_dealloc, so the stock subtype_dealloc would then be applicable. We decided this would be kind of weird and didn't do it that way. TODO: - More code comments - Figure out how not to increase the size of TensorImpl with the new bool field - Add some torture tests for the THPVariable_subclass_dealloc, e.g., involving subclasses of Tensors that do strange things with finalizers - Benchmark the impact of taking the GIL to release C++ side tensors (e.g., from autograd) - Benchmark the impact of adding a new metaclass to Tensor (probably will be done by separating out the metaclass change into its own change) - Benchmark the impact of changing THPVariable to conditionally own Tensor (as opposed to unconditionally owning it, as before) - Add tests that this actually indeed preserves the Python object Signed-off-by: Edward Z. Yang <ezyang@fb.com> Test Plan: Imported from OSS Reviewed By: albanD Differential Revision: D27765125 Pulled By: ezyang fbshipit-source-id: 857f14bdcca2900727412aff4c2e2d7f0af1415a
PyTorch is a Python package that provides two high-level features:
You can reuse your favorite Python packages such as NumPy, SciPy, and Cython to extend PyTorch when needed.
System | 3.6 | 3.7 | 3.8 |
---|---|---|---|
Linux CPU | — | ||
Linux GPU | — | ||
Windows CPU / GPU | — | — | |
Linux (ppc64le) CPU | — | — | |
Linux (ppc64le) GPU | — | — | |
Linux (aarch64) CPU |
See also the ci.pytorch.org HUD.
At a granular level, PyTorch is a library that consists of the following components:
Component | Description |
---|---|
torch | a Tensor library like NumPy, with strong GPU support |
torch.autograd | a tape-based automatic differentiation library that supports all differentiable Tensor operations in torch |
torch.jit | a compilation stack (TorchScript) to create serializable and optimizable models from PyTorch code |
torch.nn | a neural networks library deeply integrated with autograd designed for maximum flexibility |
torch.multiprocessing | Python multiprocessing, but with magical memory sharing of torch Tensors across processes. Useful for data loading and Hogwild training |
torch.utils | DataLoader and other utility functions for convenience |
Usually, PyTorch is used either as:
Elaborating Further:
If you use NumPy, then you have used Tensors (a.k.a. ndarray).
PyTorch provides Tensors that can live either on the CPU or the GPU and accelerates the computation by a huge amount.
We provide a wide variety of tensor routines to accelerate and fit your scientific computation needs such as slicing, indexing, math operations, linear algebra, reductions. And they are fast!
PyTorch has a unique way of building neural networks: using and replaying a tape recorder.
Most frameworks such as TensorFlow, Theano, Caffe, and CNTK have a static view of the world. One has to build a neural network and reuse the same structure again and again. Changing the way the network behaves means that one has to start from scratch.
With PyTorch, we use a technique called reverse-mode auto-differentiation, which allows you to change the way your network behaves arbitrarily with zero lag or overhead. Our inspiration comes from several research papers on this topic, as well as current and past work such as torch-autograd, autograd, Chainer, etc.
While this technique is not unique to PyTorch, it's one of the fastest implementations of it to date. You get the best of speed and flexibility for your crazy research.
PyTorch is not a Python binding into a monolithic C++ framework. It is built to be deeply integrated into Python. You can use it naturally like you would use NumPy / SciPy / scikit-learn etc. You can write your new neural network layers in Python itself, using your favorite libraries and use packages such as Cython and Numba. Our goal is to not reinvent the wheel where appropriate.
PyTorch is designed to be intuitive, linear in thought, and easy to use. When you execute a line of code, it gets executed. There isn't an asynchronous view of the world. When you drop into a debugger or receive error messages and stack traces, understanding them is straightforward. The stack trace points to exactly where your code was defined. We hope you never spend hours debugging your code because of bad stack traces or asynchronous and opaque execution engines.
PyTorch has minimal framework overhead. We integrate acceleration libraries such as Intel MKL and NVIDIA (cuDNN, NCCL) to maximize speed. At the core, its CPU and GPU Tensor and neural network backends (TH, THC, THNN, THCUNN) are mature and have been tested for years.
Hence, PyTorch is quite fast – whether you run small or large neural networks.
The memory usage in PyTorch is extremely efficient compared to Torch or some of the alternatives. We've written custom memory allocators for the GPU to make sure that your deep learning models are maximally memory efficient. This enables you to train bigger deep learning models than before.
Writing new neural network modules, or interfacing with PyTorch's Tensor API was designed to be straightforward and with minimal abstractions.
You can write new neural network layers in Python using the torch API or your favorite NumPy-based libraries such as SciPy.
If you want to write your layers in C/C++, we provide a convenient extension API that is efficient and with minimal boilerplate. No wrapper code needs to be written. You can see a tutorial here and an example here.
Commands to install from binaries via Conda or pip wheels are on our website: https://pytorch.org
Python wheels for NVIDIA's Jetson Nano, Jetson TX2, and Jetson AGX Xavier are available via the following URLs:
They require JetPack 4.2 and above, and @dusty-nv maintains them
If you are installing from source, you will need Python 3.6.2 or later and a C++14 compiler. Also, we highly recommend installing an Anaconda environment. You will get a high-quality BLAS library (MKL) and you get controlled dependency versions regardless of your Linux distro.
Once you have Anaconda installed, here are the instructions.
If you want to compile with CUDA support, install
If you want to disable CUDA support, export environment variable USE_CUDA=0
. Other potentially useful environment variables may be found in setup.py
.
If you are building for NVIDIA's Jetson platforms (Jetson Nano, TX1, TX2, AGX Xavier), Instructions to install PyTorch for Jetson Nano are available here
If you want to compile with ROCm support, install
If you want to disable ROCm support, export environment variable USE_ROCM=0
. Other potentially useful environment variables may be found in setup.py
.
Common
conda install astunparse numpy ninja pyyaml mkl mkl-include setuptools cmake cffi typing_extensions future six requests dataclasses
On Linux
# CUDA only: Add LAPACK support for the GPU if needed conda install -c pytorch magma-cuda110 # or the magma-cuda* that matches your CUDA version from https://anaconda.org/pytorch/repo
On MacOS
# Add these packages if torch.distributed is needed conda install pkg-config libuv
On Windows
# Add these packages if torch.distributed is needed. # Distributed package support on Windows is a prototype feature and is subject to changes. conda install -c conda-forge libuv=1.39
git clone --recursive https://github.com/pytorch/pytorch cd pytorch # if you are updating an existing checkout git submodule sync git submodule update --init --recursive
On Linux
export CMAKE_PREFIX_PATH=${CONDA_PREFIX:-"$(dirname $(which conda))/../"} python setup.py install
Note that if you are compiling for ROCm, you must run this command first:
python tools/amd_build/build_amd.py
Note that if you are using Anaconda, you may experience an error caused by the linker:
build/temp.linux-x86_64-3.7/torch/csrc/stub.o: file not recognized: file format not recognized collect2: error: ld returned 1 exit status error: command 'g++' failed with exit status 1
This is caused by ld
from Conda environment shadowing the system ld
. You should use a newer version of Python that fixes this issue. The recommended Python version is 3.6.10+, 3.7.6+ and 3.8.1+.
On macOS
export CMAKE_PREFIX_PATH=${CONDA_PREFIX:-"$(dirname $(which conda))/../"} MACOSX_DEPLOYMENT_TARGET=10.9 CC=clang CXX=clang++ python setup.py install
Each CUDA version only supports one particular XCode version. The following combinations have been reported to work with PyTorch.
CUDA version | XCode version |
---|---|
10.0 | XCode 9.4 |
10.1 | XCode 10.1 |
On Windows
Choose Correct Visual Studio Version.
Sometimes there are regressions in new versions of Visual Studio, so it‘s best to use the same Visual Studio Version 16.8.5 as Pytorch CI’s. You can use Visual Studio Enterprise, Professional or Community though PyTorch CI uses Visual Studio BuildTools.
If you want to build legacy python code, please refer to Building on legacy code and CUDA
Build with CPU
It's fairly easy to build with CPU.
Note on OpenMP: The desired OpenMP implementation is Intel OpenMP (iomp). In order to link against iomp, you'll need to manually download the library and set up the building environment by tweaking CMAKE_INCLUDE_PATH
and LIB
. The instruction here is an example for setting up both MKL and Intel OpenMP. Without these configurations for CMake, Microsoft Visual C OpenMP runtime (vcomp) will be used.
Build with CUDA
NVTX is needed to build Pytorch with CUDA. NVTX is a part of CUDA distributive, where it is called “Nsight Compute”. To install it onto already installed CUDA run CUDA installation once again and check the corresponding checkbox. Make sure that CUDA with Nsight Compute is installed after Visual Studio.
Currently, VS 2017 / 2019, and Ninja are supported as the generator of CMake. If ninja.exe
is detected in PATH
, then Ninja will be used as the default generator, otherwise, it will use VS 2017 / 2019.
If Ninja is selected as the generator, the latest MSVC will get selected as the underlying toolchain.
Additional libraries such as Magma, oneDNN, a.k.a MKLDNN or DNNL, and Sccache are often needed. Please refer to the installation-helper to install them.
You can refer to the build_pytorch.bat script for some other environment variables configurations
cmd :: [Optional] If you want to build with the VS 2017 generator for old CUDA and PyTorch, please change the value in the next line to `Visual Studio 15 2017`. :: Note: This value is useless if Ninja is detected. However, you can force that by using `set USE_NINJA=OFF`. set CMAKE_GENERATOR=Visual Studio 16 2019 :: Read the content in the previous section carefully before you proceed. :: [Optional] If you want to override the underlying toolset used by Ninja and Visual Studio with CUDA, please run the following script block. :: "Visual Studio 2019 Developer Command Prompt" will be run automatically. :: Make sure you have CMake >= 3.12 before you do this when you use the Visual Studio generator. set CMAKE_GENERATOR_TOOLSET_VERSION=14.27 set DISTUTILS_USE_SDK=1 for /f "usebackq tokens=*" %i in (`"%ProgramFiles(x86)%\Microsoft Visual Studio\Installer\vswhere.exe" -version [15^,16^) -products * -latest -property installationPath`) do call "%i\VC\Auxiliary\Build\vcvarsall.bat" x64 -vcvars_ver=%CMAKE_GENERATOR_TOOLSET_VERSION% :: [Optional] If you want to override the CUDA host compiler set CUDAHOSTCXX=C:\Program Files (x86)\Microsoft Visual Studio\2019\Community\VC\Tools\MSVC\14.27.29110\bin\HostX64\x64\cl.exe python setup.py install
You can adjust the configuration of cmake variables optionally (without building first), by doing the following. For example, adjusting the pre-detected directories for CuDNN or BLAS can be done with such a step.
On Linux
export CMAKE_PREFIX_PATH=${CONDA_PREFIX:-"$(dirname $(which conda))/../"} python setup.py build --cmake-only ccmake build # or cmake-gui build
On macOS
export CMAKE_PREFIX_PATH=${CONDA_PREFIX:-"$(dirname $(which conda))/../"} MACOSX_DEPLOYMENT_TARGET=10.9 CC=clang CXX=clang++ python setup.py build --cmake-only ccmake build # or cmake-gui build
You can also pull a pre-built docker image from Docker Hub and run with docker v19.03+
docker run --gpus all --rm -ti --ipc=host pytorch/pytorch:latest
Please note that PyTorch uses shared memory to share data between processes, so if torch multiprocessing is used (e.g. for multithreaded data loaders) the default shared memory segment size that container runs with is not enough, and you should increase shared memory size either with --ipc=host
or --shm-size
command line options to nvidia-docker run
.
NOTE: Must be built with a docker version > 18.06
The Dockerfile
is supplied to build images with CUDA 11.1 support and cuDNN v8. You can pass PYTHON_VERSION=x.y
make variable to specify which Python version is to be used by Miniconda, or leave it unset to use the default.
make -f docker.Makefile # images are tagged as docker.io/${your_docker_username}/pytorch
To build documentation in various formats, you will need Sphinx and the readthedocs theme.
cd docs/ pip install -r requirements.txt
You can then build the documentation by running make <format>
from the docs/
folder. Run make
to get a list of all available output formats.
If you get a katex error run npm install katex
. If it persists, try npm install -g katex
Installation instructions and binaries for previous PyTorch versions may be found on Our Website.
Three-pointers to get you started:
PyTorch has a 90-day release cycle (major releases). Please let us know if you encounter a bug by filing an issue.
We appreciate all contributions. If you are planning to contribute back bug-fixes, please do so without any further discussion.
If you plan to contribute new features, utility functions, or extensions to the core, please first open an issue and discuss the feature with us. Sending a PR without discussion might end up resulting in a rejected PR because we might be taking the core in a different direction than you might be aware of.
To learn more about making a contribution to Pytorch, please see our Contribution page.
PyTorch is a community-driven project with several skillful engineers and researchers contributing to it.
PyTorch is currently maintained by Adam Paszke, Sam Gross, Soumith Chintala and Gregory Chanan with major contributions coming from hundreds of talented individuals in various forms and means. A non-exhaustive but growing list needs to mention: Trevor Killeen, Sasank Chilamkurthy, Sergey Zagoruyko, Adam Lerer, Francisco Massa, Alykhan Tejani, Luca Antiga, Alban Desmaison, Andreas Koepf, James Bradbury, Zeming Lin, Yuandong Tian, Guillaume Lample, Marat Dukhan, Natalia Gimelshein, Christian Sarofeen, Martin Raison, Edward Yang, Zachary Devito.
Note: This project is unrelated to hughperkins/pytorch with the same name. Hugh is a valuable contributor to the Torch community and has helped with many things Torch and PyTorch.
PyTorch has a BSD-style license, as found in the LICENSE file.