| # Copyright 1999-2015 Gentoo Foundation |
| # Distributed under the terms of the GNU General Public License v2 |
| # $Id$ |
| |
| EAPI=5 |
| |
| PYTHON_COMPAT=( python2_7 ) |
| |
| inherit cmake-utils flag-o-matic python-single-r1 |
| |
| DESCRIPTION="C++ Sequence Analysis Library" |
| HOMEPAGE="http://www.seqan.de/" |
| SRC_URI="http://packages.${PN}.de/${PN}-src/${PN}-src-${PV}.tar.gz" |
| |
| SLOT="0" |
| LICENSE="BSD GPL-3" |
| KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" |
| IUSE="cpu_flags_x86_sse4_1" |
| |
| REQUIRED_USE="${PYTHON_REQUIRED_USE} cpu_flags_x86_sse4_1" |
| |
| RDEPEND="${PYTHON_DEPS} |
| dev-libs/boost:= |
| sci-biology/samtools" |
| DEPEND="${RDEPEND}" |
| |
| S="${WORKDIR}"/${PN}-${PN}-v${PV} |
| |
| PATCHES=( |
| "${FILESDIR}"/${P}-zlib.patch |
| ) |
| |
| src_prepare() { |
| rm -f \ |
| util/cmake/FindZLIB.cmake \ |
| || die |
| cmake-utils_src_prepare |
| } |
| |
| src_configure() { |
| local mycmakeargs=( |
| -DBoost_NO_BOOST_CMAKE=ON |
| ) |
| cmake-utils_src_configure |
| } |
| |
| src_install() { |
| mkdir -p "${BUILD_DIR}"/docs/html || die |
| cmake-utils_src_install |
| chmod 755 "${ED}"/usr/bin/*sh || die |
| } |
