| cmake_minimum_required (VERSION 2.6) |
| project(fasttree C) |
| |
| option(USE_OPENMP "Use OpenMP to parallelize many of the steps in computing a tree" ON) |
| option(USE_DOUBLE "Use double precission" OFF) |
| option(HAS_SSE3 "Use SSE2/SSE3 instructions to speed up some inner loops" ON) |
| |
| if(USE_OPENMP) |
| SET( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -DOPENMP -fopenmp" ) |
| SET( CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -DOPENMP -fopenmp" ) |
| endif(USE_OPENMP) |
| |
| if(USE_DOUBLE) |
| SET( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -DUSE_DOUBLE" ) |
| endif(USE_DOUBLE) |
| |
| if(NOT HAS_SSE3) |
| SET( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -DNO_SSE" ) |
| endif(NOT HAS_SSE3) |
| |
| |
| add_executable(FastTree FastTree-${VERSION}.c) |
| add_executable(FastTreeUPGMA FastTreeUPGMA-${VERSION}.c) |
| |
| target_link_libraries(FastTree m) |
| target_link_libraries(FastTreeUPGMA m) |
| |
| install (TARGETS FastTree FastTreeUPGMA DESTINATION bin) |
| |
| install(FILES MOTree.pm CompareTree.pl CompareToBootstrap.pl DESTINATION share/fasttree) |
